Release 5.0 HC


Detailed assembly statistics
 
  All libraries
Starting data (reads) 445,717
% masked -
% GC 43
 
Assembled Zea mays (AZMs) 92,484
     Average number of reads per AZM 4.00
     Average length of AZMs (bp) 1,496
     Maximum length of AZMs (bp) 8,957
Singleton sequences 75,518
Total AZM and singleton sequences 168,002


Clone statistics
 
  All libraries
Plasmid clones 270,972
Clustered clones* 164,688
     Average number of clones per AZM 2.54
     Maximum number of clones per AZM 209
Singleton clones** 66,564
Split clones*** 39,720


*Clustered clones = Clones that have been successfully assembled into AZMs with other clones
**Singleton clones = Clones that have failed to form an assembly with other clones (may consist of single end reads or overlapping paired end reads)
***Split clones = Clones for which the paired end reads assembled into separate AZMs